This function will give you a Cq plot. Therefore the Cq values are plotted. You need to have data.cq list from make.cq.data() function.
plot.Cq(CqType = "SD", onlyNumeric = FALSE)
this is the Cq value type that should be used.
Will only use samples that are a numerical (e.g. percentage)
returns a ggplot with the Cq values for both genotypes.